CDS

Accession Number TCMCG057C04216
gbkey CDS
Protein Id XP_018471034.1
Location complement(join(1324913..1324921,1324998..1325063,1325137..1325190,1325274..1325474,1325571..1325783,1325886..1326133,1326214..1326435,1326498..1326628,1326725..1326872,1327097..1327154,1327323..1327628,1327719..1327802,1327871..1328209,1328285..1328370,1328926..1330009))
Gene LOC108842567
GeneID 108842567
Organism Raphanus sativus

Protein

Length 1082aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615532.1
Definition PREDICTED: uncharacterized protein LOC108842567 isoform X11 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description PHD finger family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11380        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010093        [VIEW IN EMBL-EBI]
GO:0010314        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016278        [VIEW IN EMBL-EBI]
GO:0016279        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018024        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048449        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051568        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0090701        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901981        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCCTTGACCAATGCCAGTGGCCGGAGAAGATGACGGGAATCGATTCGTTAGCTCAGGCGAGCAAACACCTCTCGGAGAGGTCTCCTTACGATGTTCCTGAAGATGGTTTAGCTCTGGGGTTGAGTGTGAGTACCTTACCCGTTGCGTTGGCTAATTGGTTGAACCAGAAGGATGATAATAAGAAGCGGCGTAAGAAGTCTCACCACGGGACTGAGACGAATAAGAAGAAGTCTTCTAGGGTAGGGGAGAAGTTGAGAGGTGGGAGTGTTTGGGTTGAGCATGAGGACTACTTTAGGCGCTTAGAGGCTCCTGATTTAGAAACTTTGTCAGGTTTAGCTTCTCTACGTTCTTTATCTTATGGAAACTGCTTTTATGTTCCTTCTGTGGAGTACGAATCGGTTAGTACTCCACAGAGGGAAACTGACGCGGCTGCTAGTAACGAGGATGTTAAAGACATTCTTAGTGAAGAAGTGTCTGAAGATGTTGGGAAGCCAATGAGTGTTGATGATGAGATCTCTTCTGGTGGTTTAGAATGGATTTTAGGTTGTAGAAATAGGATTTTGTTGACATCAGAAAGGCCGTCGAAGAAGCGGAGGCGTCTTGGTAGGGATGCAGGTTTGGAGAAATTAGTGGTTGCTGCTCCTTGCAGAGGGAATGCGTTGTTATGTGATTTTTGCTGCACTGGTGGTGATGCCAAGGGATATCGTCACCAGCTAATTGATTGTACTTCCTGCAAAGCTACAGTTCATAAAAAATGCTACGGTGTGGTTGAGGATACGGATAAGGCTTGGTTGTGCTCCTGGTGTGAGCTGGAGAATGGTTGTAGTGATAGTGAAAGACCGTGCTCGCTTTGTCCCAAGAAGGGTGGTGTTCTGAAACCGGTTCTCTCGAAAACTGAGAATGGCGGGCCACCGGAGTTTGCTCATCTGTATTGTTCTCTGTGGATGCCTGAGGTGTATATAGAAGACTTGAATAAAATGGAGCCTATCTTGAATTTGCCTGGAATAAAAGAAACTCGCAGGAAGTTATTGTGTAACTTGTGCAAGGTGAAATCTGGTGCTTGCGTTCGATGTTGTTATGCAACATGCCGAGCATCTTTCCATCCTATATGTGCAAGGGAGGCAGGGAATAGGCTAGAAATCTGGGGAAAACATGGGTGTGATACTGTTGAACTGCGAGCTTTCTGCTCGAAGCATTCAGATATTCAAGAAAGTGGAAGGCCTATAAAGGACGGAGATATTAATGCAGCTGACCCTACTGTATGTCATCTTCCATCAGAATCTATAAGAGATCGCCCAAGTAATGATGAGACGGGAGTCGAAGTAGGAACACAAGGTACAGGCTCTGATATTTCGAGAAACAGTGCGTTGCAAGAACTGGAATCACCACGTTCAGAATTTGACAGGTCTGCAACACACATTGTTGAATCAGGGATGACTGAGAGGAGCACAGATAATGAAAAAACTCGATCCGAGTCTCTTAGTTTTGTATTGATTCTGAAAAAGTTGATCGACCTGGGTAAAGTGGATGTGAAGGATGTGGCTGCAGAGATTGGGGTCAATCCTGATGCTTTGAATGCCAAACTTGGGGATGGAGACTTGTTACCTGATTTACTAGGCAAGATAGTTAAATGGCTTAGACAGCATGCACACATGGGTAATAGGGACAAATGCGGAAATTTTAAAAGTACGAACACAACTAAATCTGAGCGTTGGGCAGATATCTGTACTGAAGGCACTGTGATGTTAGGTTCTGACATTGTTTTTTCTCTGGAGCGAACCTCTGCTGAAAATTGTACTGGTAATGGTTTTGTGGTCGAAGAAGCTGAAGCTAAGCCAGTTTTGAAAAAAGAAATCAGTGGGAATTTGCCATCTGATCATTCTTCAGAAGAACAGAAATCAGTAGTGCTTGATCAGGAATTTCATCTTGGGAAAAATTCAGTTCATCTTTCTGATGATCACGGAGGAGAATTAAATCCCATTTCGTCTGGAGTGATGGTGGAGAATGCCTTTTCTGTGAGGCCAAATAGTTCTCATATGCCAAATAGTTCTCATAACCGTAGAATTTTGAACTGTCCAAGTCCTATTATCTTGGATCTCCTTGATCGTGAAGCATATCCTGGTTTCAATCCTCATCCTTATATCCACAAGGAATTGTCAGAGATGGACAAGAGAAAGATCCTGAAAAGCAGCACGAATTCTTATGAGGATAGGATGACAAACGAACCTGATGGCACTGAAGAAGGAACAAAACATCTGCAGGACGCTGGCGATCACACTATCTGTTGTGATTACCAAAGTCAGAGTGCAGAGCGCGGAGATACATATTGTCAGTTAGCTAAAGCTGGGAAACTGGGCATACTGGATATGTCTCCTAAAGATGAAGTGGAAGGAGAACTTCTATATTATCAACTTCAGTTACTTGGCACCGGAGTTTCAAGAAAACAACTATCGGACGATCTAGCCTACGCAGTTACCAAAAAGCTGCCCCTGGAGATTGATGAAGAGCATGGACGAAGATGGGATGATGTTCTGGTCAACAAATATTTCCACGATGTCAGGGAAGCAAGAAAGCAAGGCAGGAAAGAGAAAAGACACAAAGAAGCCCAGGCTGTTCTAGCTGCTGCTACTGCAGCAGCAGCAACATCTTCTCGGAATACATCGCTCAGGAAAGATATGACAGAAGAACCTGCTCAACAAGAGATGAGTACGTATAGACGTAAAGTTACTACCAGCGGTCACCTAGTGCCACAGACAAAGGAAACACTTTTAAAGGTGCCTGTTTCTGGTCCACCATCTGATAAGAGTTCTGACCAGCGTACACGAGAATTTTCATTACAGAATCCGCGAAGTTGTGACATCTGCAGACGCTCTGAAACTATATGGAACCTGATTGTGGTGTGCTCTAGTTGCAAGGTTGCTGTTCACATGGACTGTTATAAATGTGCTAAAGAATCTAGTGGTCCTTGGTACTGTGAACTATGTGCGGAATCTACTGGTTCTTTCAATTTTTGGGAAAAACCGCATTCTACTACAGAATGTGCTTTATGTGGAGGCACAACTGGGGCTTTTAGGAAAGCCACAGATGGCCAGTGGGTACATGCATTTTGTGCTGAGTGGTCTCTCGAATCAACCTTCAGAAGGGGGCAAATAAATCCTGTGCAGGGAGTGGAATCTCTGGCCAAGAACACCAGCACTTGTTGTGTATGCCAACGGATATATGGTGCATGCATTAAGTTATGGTAA
Protein:  
MSLDQCQWPEKMTGIDSLAQASKHLSERSPYDVPEDGLALGLSVSTLPVALANWLNQKDDNKKRRKKSHHGTETNKKKSSRVGEKLRGGSVWVEHEDYFRRLEAPDLETLSGLASLRSLSYGNCFYVPSVEYESVSTPQRETDAAASNEDVKDILSEEVSEDVGKPMSVDDEISSGGLEWILGCRNRILLTSERPSKKRRRLGRDAGLEKLVVAAPCRGNALLCDFCCTGGDAKGYRHQLIDCTSCKATVHKKCYGVVEDTDKAWLCSWCELENGCSDSERPCSLCPKKGGVLKPVLSKTENGGPPEFAHLYCSLWMPEVYIEDLNKMEPILNLPGIKETRRKLLCNLCKVKSGACVRCCYATCRASFHPICAREAGNRLEIWGKHGCDTVELRAFCSKHSDIQESGRPIKDGDINAADPTVCHLPSESIRDRPSNDETGVEVGTQGTGSDISRNSALQELESPRSEFDRSATHIVESGMTERSTDNEKTRSESLSFVLILKKLIDLGKVDVKDVAAEIGVNPDALNAKLGDGDLLPDLLGKIVKWLRQHAHMGNRDKCGNFKSTNTTKSERWADICTEGTVMLGSDIVFSLERTSAENCTGNGFVVEEAEAKPVLKKEISGNLPSDHSSEEQKSVVLDQEFHLGKNSVHLSDDHGGELNPISSGVMVENAFSVRPNSSHMPNSSHNRRILNCPSPIILDLLDREAYPGFNPHPYIHKELSEMDKRKILKSSTNSYEDRMTNEPDGTEEGTKHLQDAGDHTICCDYQSQSAERGDTYCQLAKAGKLGILDMSPKDEVEGELLYYQLQLLGTGVSRKQLSDDLAYAVTKKLPLEIDEEHGRRWDDVLVNKYFHDVREARKQGRKEKRHKEAQAVLAAATAAAATSSRNTSLRKDMTEEPAQQEMSTYRRKVTTSGHLVPQTKETLLKVPVSGPPSDKSSDQRTREFSLQNPRSCDICRRSETIWNLIVVCSSCKVAVHMDCYKCAKESSGPWYCELCAESTGSFNFWEKPHSTTECALCGGTTGAFRKATDGQWVHAFCAEWSLESTFRRGQINPVQGVESLAKNTSTCCVCQRIYGACIKLW